Payroll tax: how it works and when it applies
Nobody plans to get caught by payroll tax. It just happens: a business hires steadily, the wage bill climbs, and one day it's over a threshold nobody was watching. Payroll tax is a state and territory tax, applied once total wages cross a limit that's different in every jurisdiction, and it has nothing to do with PAYG withholding or income tax. This one's a tax on you as the employer, not on your employees. Because thresholds, rates and rules all vary by state, growing businesses cross into payroll tax territory more often than you'd think. Below is how the tax actually works, and the moments that should send you back to check your numbers.
What payroll tax is, and what it is not
Each state and territory levies payroll tax on the total taxable wages an employer pays. It's not the tax you withhold from employee pays; that's PAYG withholding, a federal obligation you collect on the ATO's behalf. Payroll tax is an extra cost you carry as the employer, calculated on the wage bill itself once it clears the relevant threshold.
Every state and territory sets its own threshold and rate and runs the tax through its own revenue office. The rules look broadly similar across the country, but the differences matter, so check with the revenue office in each state or territory where you employ people.
What counts as wages
The definition of wages here is wider than most owners expect. Depending on the jurisdiction, taxable wages can include:
- Salaries, wages, commissions, bonuses and allowances
- Super contributions, including the compulsory super guarantee
- Fringe benefits provided to employees
- Termination payments, in whole or in part
- Payments to some contractors, where contractor provisions deem certain arrangements to be wages
- Wages paid by related businesses, which can be grouped together
The contractor provisions and grouping rules are where most businesses get caught. A regular payment to a contractor can count as wages for payroll tax even where that person is a genuine contractor for every other purpose. Run related entities, and their wage bills might be grouped, meaning the combined total gets measured against a single threshold, not one each.
When you need to register
You generally need to register with the revenue office in each state or territory where you pay wages once your Australia wide wages pass that jurisdiction's threshold. Operate across multiple states and the threshold's typically apportioned, lowering the wage level at which tax kicks in for each place. Registration deadlines and lodgement cycles vary, though most registered employers lodge monthly with an annual reconciliation.
Because thresholds and rates change and differ by jurisdiction, we're deliberately not quoting any here. Check the current figures directly with the relevant state or territory revenue office, or get your accountant or bookkeeper to keep an eye on your position.
Keeping payroll tax manageable
Track total wages, not just headcount
The threshold's measured in dollars, including super and other items, not in employee numbers. A small team of well paid specialists can cross the threshold before a much larger team of part timers does. Your bookkeeping should give you a running total of taxable wages across every entity and state you operate in.
Understand grouping early
Running more than one entity with common ownership or shared employees? Get advice on whether they're grouped for payroll tax before you assume each one gets its own threshold. Grouping is one of the most common findings in a payroll tax audit.
Review contractor payments
Where you're making regular payments to contractors, check whether your state's contractor provisions deem those payments to be wages. Several exemptions exist and they're specific, so work through it properly with the revenue office guidance or a professional rather than assuming you're covered.
Where NextEra fits
Because NextEra manages payroll and keeps your books current every month, we can see when total wages are approaching the point where payroll tax deserves a proper look, and flag it before the revenue office does. A Strategic Finance Review also examines how wages, super and contractor payments are recorded across your entities, so the numbers behind that judgement are right.
Quick answers
No. PAYG withholding is federal tax withheld from employee pays and sent to the ATO. Payroll tax is a separate state or territory tax the employer pays on its total wage bill once it clears the local threshold.
This article is general information for Australian businesses, current at the published date. It is not financial, tax or legal advice. Speak to a registered agent or adviser about your circumstances before acting.

Jamee White, CPA
Founder of NextEra Bookkeeping. Jamee leads a team supporting established Australian businesses with strategic bookkeeping, reporting, payroll and Xero, and is a multiple national awards finalist across bookkeeping and finance.